ecotyper.rcompat¶
R semantics needed for exact parity: RNG and sample, number parsing and
formatting, hclust/cutree/dist/silhouette, cor/var/mean
with R’s long-double accumulation, quantiles, BH, t-test, Wilcoxon, string
collation, merge/order.
Modules
Hierarchical clustering and silhouettes exactly as in R. |
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String collation as used by R's |
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Fused multiply-add for numba kernels. |
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data.frame semantics needed to reproduce EcoTyper's tables row for row. |
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Readers/writers for the tab-delimited files EcoTyper's R scripts exchange. |
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Text → double conversion exactly as R does it. |
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R's default random number generator (Mersenne-Twister + Rejection sampling). |
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R base/stats numerics reproduced to the last bit where practical. |